Publicaciones indexadas en el ISI Web of ScienceHernández-Sánchez, V., Lang, E., and Wittich, R.-M.. (2013).
The three-species consortium of genetically improved strains Cupriavidus necator RW112, Burkholderia xenovorans RW118, and Pseudomonas pseudoalcaligenes RW120, grows with technical polychlorobiphenyl, Aroclor 1242. Frontiers in Microbiology: section Microbiotechnology, Ecotoxicology and Bioremediation 4, article 90:1-8.
Silva-Jiménez, H., Ramos, J.L., Krell, T.. (2012).
Construction of a prototype two-component system from the phosphorelay system TodS/TodT. Protein Engineering Design & Selection 25:159-69 .
Arce-Rodríguez A, Durante-Rodríguez G, Platero R, Krell T, Calles B, de Lorenzo V.. (2012).
The Crp regulator of Pseudomonas putida: evidence of an unusually high affinity for its physiological effector, cAMP.. Environmental Microbiology 14: 702-713.
Fischer, S., Godino, A., Quesada, J.M., Bueno, M., Jofré, E., Mori, G., and Espinosa-Urgel, M.. (2012).
Characterization of a phage-like pyocin from the plant growth-promoting rhizobacterium Pseudomonas fluorescens SF4c. Microbiology (SGM) 158:1493-1503.
Fernández-Piñar, R., Espinosa-Urgel, M., Dubern, J., Heeb, S., Ramos, J.L., and Cámara, M.. (2012).
Fatty acid-mediated signalling between two Pseudomonas species. . Environmental Microbiology Reports 4:417-423.
Hernández-Sánchez, V. and Wittich, R.-M.. (2012).
Possible reasons for past failures of genetic engineering techniques for creating novel, xenobiotics-degrading bacteria. Bioengineered 3:1-2.
Martínez-Gil, M., Romero, D., Kolter, R., and Espinosa-Urgel, M.. (2012).
Calcium causes multimerization of the large adhesin LapF and modulates biofilm formation by Pseudomonas putida.. Journal of Bacteriology 194:6782-6789.
Quesada, J.M., Soriano, M.I., and Espinosa-Urgel, M.. (2012).
Stability of a Pseudomonas putida KT2440 bacteriophage-carried genomic island and its impact on rhizosphere fitness.. Applied and Environmental Microbiology 78:6963-6974.
Fernández-Piñar, R., Cámara, M., Soriano, M.I., Dubern, J., Heeb, S., Ramos, J.L., and Espinosa-Urgel, M. . (2011).
PpoR, an orphan LuxR-family protein of Pseudomonas putida KT2440, modulates competitive fitness and surface motility independently of N-acylhomoserine lactones.. Environ. Microbiol. Rep. 3:79-85.
Yousef-Coronado, F., Yang, L., Molin, S., and Espinosa-Urgel, M. (2011).
Selection of hyperadherent mutants in Pseudomonas putida biofilms. Microbiology SGM 157:2257-2265.
Suárez-Suárez, A., Tovar-Sánchez, A., López-López, A., Yarza, P., Orfila, A., Terrados, J., Arnds, J., Marqués, S., Niemann, H., Amann, R., Rosselló-Móra, R.. (2011).
Bacterial Diversity in a permanent anaerobic layer of a Calcareous Sandy Sediment of Mallorca and their Response to Polyaromatic Hydrocarbon Contamination. Environmental Microbiology Reports en prensa:en prensa.
Krell, T., Lacal, J., Muñoz-Martínez, F., Reyes-Darias, J.A., Cadirci, B.H., García-Fontana, C., Ramos, J.L. . (2011).
Diversity at its best: bacterial taxis. Environmental Microbiology 13:1115-1124 .
de la Rosa, J.D., de la Campa, A.M.S., Alastuey, A., Querol, X., González-Castañedo, Y., Fernández-Camacho, R., Stein, A.F.. (2010).
Using PM10 geochemical maps for defining the origin of atmospheric pollution in Andalusia (Southern Spain). Atmospheric Environment 44:4595-4605.
Daniels, C., Godoy, P., Duque, E., Molina-Henares, M.A., de la Torre, J., del Arco, J.M., Herrera, C., Segura, A., Guazzaroni, M.E., Ferrer, M., Ramos, J.L.. (2010).
Global regulation of food supply by Pseudomonas putida DOT-T1E. Journal of Bacteriology 192:2169-2181.
Domínguez-Cuevas, P., Ramos, J.L., Marqués, S.. (2010).
Sequential XylS-CTD binding to the Pm promoter induces DNA bending prior to activation. Journal of Bacteriology 192:2682-2690.
Daniels, C., Daddaoua, A., Lu, D., Zhang, X.D., Ramos, J.L.. (2010).
Domain cross-talk during effector binding to the multidrug binding TTGR regulator. Journal of Biological Chemistry 285:21372-21381.
Lacal, J., Alfonso, C., Liu, X.X., Parales, R.E., Morel, B., Conejero-Lara, F., Rivas, G., Duque, E., Ramos, J.L., Krell, T.. (2010).
Identification of a chemoreceptor for tricarboxylic acid cycle intermediates differential chemotactic response towards receptor ligands. Journal of Biological Chemistry 285:23124-23134.
Martínez-Gil, M., Yousef-Coronado, F., Espinosa-Urgel, M.. (2010).
LapF, the second largest Pseudomonas putida protein, contributes to plant root colonization and determines biofilm architecture. Molecular Microbiology 77:549-561.
Herrera, M.C., Duque, E., Rodríguez-Herva, J.J., Fernández-Escamilla, A.M., Ramos, J.L.. (2010).
Identification and characterization of the PhhR regulon in Pseudomonas putida. Environmental Microbiology 12:1427-1438 .
de Medina, F.S., Daddaoua, A., Requena, P., Capitán-Cañadas, F., Zarzuelo, A., Suárez, M.D., Martínez-Augustín, O.. (2010).
Food ingredients, immunity and inflammation: animal and in vitro models New insights into the immunological effects of food bioactive peptides in animal models of intestinal inflammation. Proceedings of the Nutrition Society 69:454-462.
Busch, A., Lacal, J., Silva-Jiménez, H., Krell, T., Ramos, J.L.. (2010).
Catabolite repression of the TodS/TodT two-component system and effector-dependent transphosphorylation of TodT as the basis for toluene dioxygenase catabolic pathway control. Journal of Bacteriology 192:4246-4250.
Lacal, J., García-Fontana, C., Muñoz-Martínez, F., Ramos, J.L., Krell, T.. (2010).
Sensing of environmental signals: classification of chemoreceptors according to the size of their ligand binding regions. Environmental Microbiology 12:2873-2884.
Daddaoua, A., Krell, T., Alfonso, C., Morel, B., Ramos, J.L.. (2010).
Compartmentalized glucose metabolism in Pseudomonas putida is controlled by the PtxS repressor. Journal of Bacteriology 192:4357-4366.
Quesada, J.M., Penyalver, R., Pérez-Panadés, J., Salcedo, C.I., Carbonell, E.A., López, M.M.. (2010).
Comparison of chemical treatments for reducing epiphytic Pseudomonas savastanoi pv. savastanoi populations and for improving subsequent control of olive knot disease. Crop Protection 29:1413-1420.
Ramos, J.L.. (2010).
Variations on transcriptional and post-transcriptional processes in bacteria. FEMS Microbiology Reviews 34:607-610.
Rama, A.R., Prados, J., Melguizo, C., Ortiz, R., Álvarez, P.J., Rodríguez-Serrano, F., Hita, F., Ramos, J.L., Burgos, M., Aranega, A.. (2010).
E phage gene transfection enhances sensitivity of lung and colon cancer cells to chemotherapeutic agents. International Journal of Oncology 37:1503-1514.
Moreno, T., Querol, X., Alastuey, A., de la Rosa, J., de la Campa, A.M.S., Minguillon, M., Pandolfi, M., González-Castañedo, Y., Monfort, E., Gibbons, W.. (2010).
Variations in vanadium, nickel and lanthanoid element concentrations in urban air. Science of the Total Environment 408:4569-4579.
Barahona, E., Navazo, A., Yousef-Coronado, F., de Carcer, D.A., Martínez-Granero, F., Espinosa-Urgel, M., Martín, M., Rivilla, R.. (2010).
Efficient rhizosphere colonization by Pseudomonas fluorescens f113 mutants unable to form biofilms on abiotic surfaces. Environmental Microbiology 12:3185-3195.
Aguilera, I., Daponte, A., Gil, F., Hernández, A.F., Godoy, P., Pla, A., Ramos, J.L.. (2010).
Urinary levels of arsenic and heavy metals in children and adolescents living in the industrialised area of Ria of Huelva (SW Spain). Environment International 36:563-569.
Fernández-Camacho, R., Rodríguez, S., de la Rosa, J., de la Campa, A.M.S., Viana, M., Alastuey, A., Querol, X.. (2010).
Ultrafine particle formation in the inland sea breeze airflow in Southwest Europe. Atmospheric Chemistry and Physics 10:9615-9630.
Daniels, C., Espinosa-Urgel, M., Niqui-Arroyo, J.-L., Michán, C., Ramos, J.L.. (2010).
Metabolic engineering, new antibiotics and biofilm viscoelasticity. Microbial Biotechnology 3:10-14.
Nogales, J., Domínguez-Ferreras, A., Amaya-Gómez, C.V., van Dillewijn, P., Cuéllar, V., Sanjuán, J., Olivares, J., Soto, M.J.. (2010).
Transcriptome profiling of a Sinorhizobium meliloti fadD mutant reveals the role of rhizobactin 1021 biosynthesis and regulation genes in the control of swarming. BMC Genomics 11:Artículo 157 (17 páginas).
Daniels, C., Michán, C., Ramos, J.L.. (2010).
Microbial Biotechnology: biofuels, genotoxicity reporters and robust agro-ecosystems. Microbial Biotechnology 3:239-241.
Fernández-Camacho, R., de la Rosa, J., de la Campa, A.M.S., González-Castañedo, Y., Alastuey, A., Querol, X., Rodríguez, S.. (2010).
Geochemical characterization of Cu-smelter emission plumes with impact in an urban area of SW Spain. Atmospheric Research 96:590-601.
Daniels, C., Krell, T., Michán, C., Ramos, J.L.. (2010).
Struggling to get a universal meningococcal vaccine and novel uses for bacterial toxins in cancer treatment. Microbial Biotechnology 3:359-361.
de la Campa, A.M.S., de la Rosa, J.D., González-Castañedo, Y., Fernández-Camacho, R., Alastuey, A., Querol, X., Pío, C.. (2010).
High concentrations of heavy metals in PM from ceramic factories of Southern Spain. Atmospheric Research 96:633-644.
Godoy, P., Molina-Henares, A.J., de la Torre, J., Duque, E., Ramos, J.L.. (2010).
Characterization of the RND family of multidrug efflux pumps: in silico to in vivo confirmation of four functionally distinct subgroups. Microbial Biotechnology 3:691-700.
Molina-Henares, M.A., de la Torre, J., García-Salamanca, A., Molina-Henares, A.J., Herrera, M.C., Ramos, J.L., Duque, E.. (2010).
Identification of conditionally essential genes for growth of Pseudomonas putida KT2440 on minimal medium through the screening of a genome-wide mutant library. Environmental Microbiology 12:1468-1485.
Michán, C., Daniels, C., Ramos, J.L. . (2010).
New molecular techniques for pathogen analysis, in silico determination of RND efflux pump substrate specificity, shotgun proteomic monitoring of bioremediation and yeast bio-applications. Microbial Biotechnology 3:624-627.
García, V., Godoy, P., Daniels, C., Hurtado, A., Ramos, J.L., Segura, A.. (2010).
Functional analysis of new transporters involved in stress tolerance in Pseudomonas putida DOT-T1E. Environmental Microbiology Reports 2:389-395.
Michán, C., Daniels, C., Fernández, M., Solano, J., Sánchez-de la Campa, A.M., Ramos, J.L. . (2010).
Sugar (ribose), spcie (peroxidase) and all thing nice (laccase hair-dyes). Microbial Biotechnology 3:131-133.
Rodríguez-Herva, J.J., Duque, E., Molina-Henares, M.A., Navarro-Avilés, G., van Dillewijn, P., de la Torre, J., Molina-Henares, A.J., Sánchez-de la Campa, A., Ran, F.A., Segura, A., Shingler, V., Ramos, J.L.. (2010).
Physiological and transcriptomic characterization of a fliA mutant of Pseudomonas putida KT2440. Environmental Microbiology Reports 2:373-380.
Lu, D., Fillet, S., Meng, C., Alguel, Y., Kloppsteck, P., Bergeron, J., Krell, T., Gallegos, M.T., Ramos, J.L., Zhang, X.. (2010).
Crystal structure of TtgV in complex with its DNA operator reveals a general model for cooperative DNA binding of tetrameric gene regulators. Gene and Development 24:2556-2565.
Matilla, M.A., Ramos, J.L., Bakker, P.A.H.M., Doornbos, R., Badri, D.V., Vivanco, J.M., Ramos-González, M.I. . (2010).
Pseudomonas putida KT2440 causes induced systemic resistance and changes in Arabidopsis root exudation. Environmental Microbiology Reports 2:381-388.
Krell, T., Lacal, J., Busch, A., Guazzaroni, M.E., Silva, H., Ramos, J.L. . (2010).
Bacterial sensor kinases: Diversity in the recognition of environmental signals. Annual Review of Microbiology 64:539-559.
Prados, J., Melguizo, C., Ortiz, R., Boulaiz, H., Carrillo, E., Segura, A., Rodríguez-Herva, J.J., Ramos, J.L., Aranega, A.. (2010).
Regression of established subcutaneous B16-F10 murine melanoma tumors after gef gene therapy associated with the mitochondrial apoptotic pathway. Experimental Dermatology 19:363-371.
Prados, J., Melguizo, C., Rama, A.R., Ortiz, R., Segura, A., Boulaiz, H., Vélez, C., Caba, O., Ramos, J.L., Aranega, A.. (2010).
Gef gene therapy enhances the therapeutic efficacy of doxorubicin to combat growth of MCF-7 breast cancer cells. Cancer Chemotherapy and Pharmacology 66:69-78.
Daniels, C., Michán, C., Krell, T., Roca, A., and Ramos, J.L.. (2009).
The heat, drugs, and knock-out systems of Microbial Biotechnology. Microbial Biotechnology 2:598-600.
Wittich, R.M., Ramos, J.L. and van Dillewijn, P.. (2009).
Microorganisms and Explosives: Mechanism of nitrogen release from TNT for use as an N-source for growth. Environmental Science & Technology 43:2773-2776.
M. C. MARTÍ, D. CAMEJO, N. FERNÁNDEZ-GARCÍA, R. RELLÁN-ÁLVAREZ, S. MARQUES, F. SEVILLA & A. JIMÉNEZ. (2009).
Effect of oil refinery sludges on the growth and antioxidant system of alfalfa plants. J Hazard Mater. 171:879-85.
Fernández, M., Duque, E., Pizarro-Tobías, P., van Dillewijn, P., Wittich, R.M. and Ramos, J.L.. (2009).
Microbial responses to xenobiotic compounds: Identification of genes that allow Pseudomonas putida KT2440 to cope with 2,4,6-trinitrotoluene. Microbial Biotechnology 2:287-294.
Ramos, J.L., Duque, E., Daniels, C., Molina, L. and Segura, A.. (2009).
Exploiting environmental niches and the potential environmental microbes. Environmental Microbiology Reports 1:275-278.
Pini, C.V., Bernal, P., Godoy, P., Ramos, J.L. and Segura, A.. (2009).
Cyclopropane fatty acids are involved in organic solvent tolerance but not in acid stress resistance in Pseudomonas putida DOT-T1E. Microbial biotechnology 2:253-261.
García, V., Godoy, P., Daniels, C., Hurtado, A., Ramos, J.L. and Segura, A.. (2009).
New transporter involved in stress tolerance in Pseudommonas putida DOT-T1E: from proteomic and transcriptomic data to functional analysis. Environmental Microbiology Reports doi:10.1111/j:1758-2229 00093.
Muñoz, R., Hernández, M., Segura, A., Gouveia, J., Rojas, A., Ramos, J.L. and Villaverde, S.. (2009).
Continuous cultures of Pseudomonas putida mt-2 overcome catabolic function loss under real case operating conditions. Applied Microbiology and Biotechnology 83:189-198.
Daddaoua, A., Krell, T. and Ramos, J.L.. (2009).
Regulation of glucose metabolism in Pseudomonas: The phosphorylative branch and the Entner-Doudoroff enzymes are regulated by arepressor containing a sugar isomerase domain. Journal Biology Chemistry 287:21360-21368.
Segura, A., Rodríguez-Conde, S., Ramos, C. and Ramos, J.L.. (2009).
Bacterial responses and interactions with plants during rhizoremediation. Microbial Biotechnology 2:452-464.
Segura, A., de Wit, P., and Preston, G.M.. (2009).
Life of microbes that interact with plants. Microbial Biotechnology 2:412-415.
Ortiz, R., Prados, J., Melguizo, C., Rama, A.R., Segura, A., Rodríguez-Serrano, F., Boulaiz, H., Hita, F., Martínez-Amat, A., Madeddu, R., Ramos, J.L. and Aranega, A.. (2009).
The cytotoxic activity of the phage E protein suppress the growth of murine B16 melanomas in vitro and in vivo. Journal of Molecular Medicine-JMM 87:899-911.
Hernández, M., Gouveia, J., Segura, A., Muñoz, R. and Villaverde, S.. (2009).
Addressing the role of the extrusion pump-bearing pGRT1 plasmid in toluene biodegradation by Pseudomonas putida DOT-T1E under real case scenarios. Water Science and Technology 60:2391-2398.
Fillet, S., Vélez, M., Lu, D., Zhang, X., Gallegos, M.T., and Ramos J.L.. (2009).
Represses two different promoters by recognizind different sequences. Journal of Bacteriology 191:1901-1909.
Busch, A., Guazzaroni, M.E., Lacal, J., Ramos, J.L., and Krell, T.. (2009).
The sensor kinase TodS operates by a phosphorelay mechanism involving two autokinase domains. Journal Biology Chemistry 284:10353-10360.
Krell, T., Busch, A., Lacal, J., Silva-Jiménez, H., and Ramos, J.L.. (2009).
The enigma of cytosolic two-component systems: a hypothesis. Environmental Microbiology Reports 1:171-176.
Ramos, J.L., Molina, L., and Segura, A.. (2009).
Removal of organic toxic chemicals in the rhizosphere and phyllosphere. Microbial Biotechnology 2:128-156.
Roca, A., Rodríguez-Herva, J.J., and Ramos, J.L.. (2009).
Redundancy of enzymes for formaldehyde detoxification in Pseudomonas putida. Journal of Bacteriology 191:3367-3374.
Ramos, J.L., Krell, T., Daniels, C., Segura, A., and Duque, E.. (2009).
Responses of Pseudomonas to small toxic molecules by a mosaic of domains. Current Opinion of Microbiology 12:215-220.
Roca, A., and Ramos, J.L.. (2009).
In vivo role of FdhD and FdmE in formate metabolism in Pseudomonas putida: Redundancy and expression in the stationary phase. Environmental Microbiology Reports 1:208-213.
Daniels, C., and Ramos, J.L.. (2009).
Microbial biotechnology from medicine to bacterial population dynamics. Microbial Biotechnology 2:304-307.
Michán, C., Ramos, J.L., and Daniels, C.. (2009).
Twenty one important things you should know. Microbial Biotechnology 2:397-400.
Ramos, J.L.. (2009).
Short and Direct Sciences: Environmental Microbiology Reports. Environmental Microbiology Reports 1:217-219.
Molina-Henares, A.J., Godoy, P., Duque, E., and Ramos, J.L.. (2009).
A general profile for the MerR family of transcriptional regulators constructed based on the semi-automated Provalidator tool. Environmental Microbiology Reports 6:518-523.
Daniels, C., and Ramos, J.L.. (2009).
Adaptive drug resistance mediated by RND efflux pumps. Clinic Microbiology Infection 15:32-36.
Herrera, M.C., Krell, T., Zhang, X., and Ramos, J.L.. (2009).
PhhR binds to target sequences at different distances with respect to RNA polymerase in order to activate transcription. Journal Molecular Biology 394:576-586.
Roca, A., Rodríguez Herva, J.J., Duque, E. and Ramos, J.L.. (2008).
Physiological responses of Pseudomonas putida to formaldehyde during detoxificatioin. Microbial Biotechnology 1:158-169.
Lacal, J., Guazzaroni, M.E., Busch, A., Krell, T. and Ramos, J.L.. (2008).
Hierarchical binding of the todt response regulator to its multiple recognition sites at the tod pathway operon promoter. J. Mol. Biol. 376:325-337.
van Dillewijn, P., Couselo, J.L., Corredoria, E., Delgado, A., Wittich, R.M., Ballester, A. and Ramos, J.L.. (2008).
Bioremediation of 2,4,6-trinitrotoluene by bacterial nitroreductase-expressing transgenic aspen. Environ. Sci. Tech. 42:7405-7410.
Blasco, R., Ramos, J.L. and Wittich, R.M.. (2008).
Pseudomonas aeruginosa strain RW41 mineralizes 4-chlorobenzenesulfonate, the mayor polar by-product from DDT manufacturing. Environ. Microbiol. 10:1591-1600.
Domínguez Cuevas, P., Marín, P., Busby, S., Ramos, J.L. and Marqués, S.. (2008).
Roles of effectors in XylS-dependent transcription activation: intramolecular domain derepression and DNA binding. J. Bacteriol. 190:3118-3128.
Prados, J., Melguizo, C., Rama, A., Ortíz, R ., Boulaiz, H., Rodríguez-Serrano, F., Caba, O., Rodríguez-Herva, J.J., Ramos, J.L. and Aránega, A.. (2008).
Combined therapy using suicide gef gene and paclitaxel enhances growth inhibition of multicellular tumour spheroids of A-549 human lung cancer cells. Int. J. Oncology 33:121-127.
Aguilera, I., Daponte, A., Gil, F., Hernández, A.F., Godoy, P., Pla, A. and Ramos, J.L.. (2008).
Biomonitoring of urinary metals in a population living in the vicinity of industrial sources: a comparison with the general population of Andalusia, Spain. Sci. Total Environ. 407:669-678.
Keller, M. and Ramos, J.L.. (2008).
Microbial goods from single cells and metagenomes. Curr. Opin. Microbiol. 11:195-197.
Lacal, J., Guazzaroni, M.E., Gutierrez del Arroyo, P., Busch, A., Vélez, M., Krell, T. and Ramos, J.L.. (2008).
Two levels of cooperativeness in the binding of todt to the tod operon promoter. J. Mol. Biol. 384:1037-1047.
van Dillewijn, P., Wittich, R.M., Caballero, A. and Ramos, J.L.. (2008).
Type II hydride transferases from different microorganisms yield nitrite and diarylamines from polynitroaromatic compounds. Appl. Environ. Microbiol. 74:6820-6823.
del Castillo, T., Duque, E. and Ramos, J.L.. (2008).
A set of activators and repressors control peripheral glucose pathways in Pseudomonas putida to yield a common central intermediate. J. Bacteriol. 190:2331-2339.
van Dillewijn, P., Wittich, R.M., Caballero, A. and Ramos, J.L.. (2008).
Subfunctionality of hydride transferases of teh old yelow enzyme family of flavoproteins of Pseudomonas putida. Appl. Environ. Microbiol. 74:6703-6708.
Wittich, R.M., Haïdour, A., van Dillewijn, P. and Ramos, J.L.. (2008).
OYE flavoprotein reductases initiate the condensation of TNT-derived intermediates to secondary diarylamines and nitrite. Environ. Sci. Technol. 42:734-739.
Barranco Medina, S., Krell, T., Bernier Villamor, L., Sevilla, F., Lázaro, J.J. and Dietz, K.J.. (2008).
Hexameric oligomerization of mitochondrial perioxiredoxin prxiif and formation of an ultrahigh affinity complex with its electron donor thioredoxin trx-o. J. Exp. Bot. 59:3259-3269.
Yousef-Coronado, F., Travieso, M.L. and Espinosa-Urgel, M.. (2008).
Different, overlapping mechanisms for colonization of abiotic and plant surfaces by Pseudomonas putida. FEMS Microbiol. Lett. 288:118-124.
Segura, A., Hurtado, A., Rivera, B. and Lazaroaie. M.M.. (2008).
Isolation of new toluene-tolerant marine strains of bacteria and characterization of their solvent-tolerance properties. J. Appl. Microbiol. 104:1408-1416.
Böltner, D., Godoy, P., Muñoz Rojas, J., Duque, E., Moreno Morillas, S., Sánchez, L. and Ramos, J.L.. (2008).
Rhizoremediation of lindane by root-colonizing esphingomonas. Microbial Biotechnology 1:87-93.
Krell, T.. (2008).
Microcalorimetry: a response to challenges in modern biotechnology. Microbial Biotechnology 1:126-136.
van dillewijn, P., Caballero, A., Paz, J.A., González-Pérez, M.M., Oliva, J.M. and Ramos, J.L.. (2007).
Bioremediation of 2,4,6-trinitrotoluene under field conditions. Environ. Sci. Tech. 41:1378-1383.
Bernal, P., Segura, A., and Ramos, J.L.. (2007).
Compensatory role of the cis-trans-isomerase and cardiolipin synthase in the membrane fluidity of Pseudomonas putida DOT-T1E. Environmental Microbiology 9:1658-1664.
Herrera, M.C. and Ramos, J.L.. (2007).
Catabolism of phenylalanine by pseudomonas putida: the NtrC-family PhhR regulator binds to two sites upstream from the phhA gene and stimulates transcription with sigma-70. J. Mol. Biol. 366:1374-1386.
Bernal P., Muñoz-Rojas, J., Hurtado, A., Ramos, J.L, and Segura, A.. (2007).
A Pseudomonas putida cardiolipin synthesis mutant exhibits increased sensitivity to drugs related to transport functionality. Environmental Microbiology 9:1135-1145.
del Castillo, T., Ramos, J.L., Rodríguez-Herva, J.J., Führer, T., Sauer, U. and Duque, E.. (2007).
Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida: Genomic and flux analysis. J. Bact. 189:5142-5152.
Yousef, F. and Espinosa-Urgel, M.. (2007).
In silico analysis of large microbial surface proteins. Research in Microbiology 158:545-550.
del Castillo, T. and Ramos, J.L.. (2007).
Simultaneous catabolite repression between glucose and toluene metabolism in Pseudomonas putida is channeled through different signaling pathways. J. Bact. 189:6602-6610.
Matilla, MA, M Espinosa-Urgel, JJ Rodriguez-Herva, JL Ramos, and MI Ramos-González. (2007).
Genomic analysis reveals the major driving forces of bacterial life in the rhizosphere. Genome Biol. 8:R179.
Domínguez-Cuevas, P., Marín, P., Marqués, S. and Ramos, J.L.. (2007).
XylS-Pm Promoter interactions through two helix-turn-helix motifs: Identifying XylS residues important for DNA binding and activation. J. Mol. Biol. 375:59-69.
Matilla, MA, JL Ramos, E Duque, JD Alché, M Espinosa-Urgel, and MI Ramos-González. (2007).
Temperature and pyoverdine-mediated iron acquisition control surface motility of Pseudomonas putida KT2440 . Environ. Microbiol. 9:1842-1850.
Rodríguez-Hervá, J.J., García, V., Hurtado, A., Segura, A. and Ramos, J.L.. (2007).
The ttgGHI solvent efflux pump operon of Pseudomonas putida DOT-T1E is located on a large self-transmisible plasmid. Environmental Microbiology 9:1550-1561.
Terán, W., Felipe, A., Fillet, S., Guazzaroni, M.E., Krell, T., Ruiz, R., Ramos, J.L. and Gallegos, M.T. (2007).
Complexity in efflux pump control: Cross-regulation by the paralogs TtgV and TtgT. Mol. Microbiol. 66:1416-1428.
Guazzaroni, M.E., Gallegos, M.T., Ramos, J.L. and Krell, T. (2007).
Identification of the effector binding site of the transcriptional regulator TtgV: Different binding modes of mono- and diaromatic effectors are reflected in differential derepression. J. Biol. Chem. 282:16308-16316.
Krell, T., Terán, W., López-Mayorga, O., Rivas, G., Jiménez, M., Molina-Henares, A.J., Gallegos, M.T. and Ramos, J.L. (2007).
Optimisation of the palindromic order of TtgR operator enhances binding cooperativity. J. Mol. Biol. 369:1188-1199.
Alguel, Y., Meng, C., Terán, W., Krell, T., Ramos, J.L., Gallegos, M.T. and Zhang, X. (2007).
Defense against multiple environmental enemies: the structure of TtgR in complex with antibiotics and plant antimicrobials. J. Mol. Biol. 369:829-840.
DARLEY, PI, HELLSTERN, JA, MEDINA-BELLVER, JI, PHILIPP, B, MARQUÉS, S and SCHINK, B.. (2007).
Heterologous expression and identification of the genes involved in anaerobic degradation of 1,3-dihydroxybenzene (resorcinol) in Azoarcus anaerobius.. J. Bacteriol. 189:3824-3833.
Wittich, R.-M. and Wolff, P.. (2007).
Growth of the genetically engineered strain Cupriavidus necator RW112 with chlorobenzoates and technical chlorobiphenyls. Microbiology 153:186-195.
Wittich, R.-M., Busse, H.-J., Kämpfer, P., Tiirola, M., Wieser, M., Macedo, A.J. and Abraham, W.-R.. (2007).
Sphingobium aromaticiconvertens sp. nov., a xenobiotic-compound-degrading bacterium from polluted river sediment. Int. J. Syst. Evol. Microbiol. 57:306-310.
Revelles, O., Wittich, R.-M. and Ramos, J.L.. (2007).
Identification of the initial steps in D-lysine catabolism in Pseudomonas putida. J. Bacteriol. 189:2787-2792.
Wittich, R.-M., Busse, H.-J., Kämpfer, P., Macedo, A.J., Tiirola, M., Wieser, M. and Abraham, W.-R.. (2007).
Sphingomonas fennica sp. nov and Sphingomonas haloaromaticamans sp. nov., outliers of the genus Sphingomonas. Int. J. Syst. Evol. Microbiol. 57:1740-1746.
González-Pérez, M.M., van Dillewijn, P., Wittich, R.-M. and Ramos, J.L.. (2007).
Escherichia coli has multiple enzymes that attack TNT and release nitrogen for growth. Environ. Microbiol. 9:1535-1540.
Busch, A., Lacal, J., Martos, A., Ramos, J.L. y Krell, T.. (2007).
Bacterial sensor kinase TodS interacts with agonistic and antagonistic signals. Proc. Natl. Acad. Sci. USA 104:13774-13779 .
Guazzaroni, M.E., Krell, T., Gutierrez Del Arroyo, P., Velez, M., Jimenez, M., Rivas, G. y Ramos, J.L. . (2007).
The Transcriptional Repressor TtgV Recognizes a Complex Operator as a Tetramer and Induces Convex DNA Bending. J. Mol. Biol. 369:927-939.
Barranco-Medina, S., Krell, T., Finkemeier, I., Sevilla, F., Lazaro, J.J. and Dietz, K.J.. (2007).
Biochemical and molecular characterization of the mitochondrial peroxiredoxin PsPrxII F from Pisum sativum. Plant. Physiol. Biochem. 45:729-39 .
Duque, E., Rodríguez-Herva, J.J., de la Torre, J., Domínguez-Cuevas, P., Muñoz-Rojas, J. and Ramos, J.L.. (2007).
The RpoT Regulon of Pseudomonas putida DOT-T1E and its Role in Stress Endurance against Solvents. J. Bacteriol 189:207-219.
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