Udaondo, Z.; Ramos, J.L.; Segura, A.; Krell, T.; Daddaoua, A.. (2018).
Regulation of carbohydrate degradation pathways in Pseudomonas involves a versatile set of transcriptional regulators. Microbial Biotechnology {Volumen 11}:442. 454
Krell, T.. (2018).
Exploring the (almost) unknown: Archaeal two-component systems. Journal of Bacteriology {Volumen }:.
Matilla, M.A.; Krell, T.. (2018).
The effect of bacterial chemotaxis on host infection and pathogenicity. FEMS Microbiol Rev {Volumen 42}:40. 67
Martín-Mora, D.; Ortega, Á.; Pérez-Maldonado, F.J.; Krell, T.; Matilla, M.A.. (2018).
The activity of the C4-dicarboxylic acid chemoreceptor of Pseudomonas aeruginosa is controlled by chemoattractants and antagonists. Scientific Reports {Volumen }:.
Bernal, P.; Llamas, M.A.; Filloux, A.. (2018).
Type VI secretion systems in plant-associated bacteria. Environmental Microbiology {Volumen 20}:1. 15
Matilla, M.A.. (2018).
Novel pressure sensors and bioreporters in the synthetic biology era. Environmental Microbiology {Volumen 20}:141. 144
Pascual, J.; Blanco, S.; Ramos, J.L.; van Dillewijn, P.. (2018).
Responses of bulk and rhizosphere soil microbial communities to thermoclimatic changes in a Mediterranean ecosystem. Soil Biology and Biochemistry {Volumen 118}:130. 144
Ortega, D.R.; Fleetwood, A.D.; Krell, T.; Harwood, C.S.; Jensen, G.J.; Zhulin, I.B.. (2017).
Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America {Volumen 114}:12809. 12814
Duque, E.; Daddaoua, A.; Cordero, B.F.; De la Torre, J.; Antonia Molina-Henares, M.; Ramos, J.L.. (2017).
Identification and elucidation of in vivo function of two alanine racemases from Pseudomonas putida KT2440. Environmental Microbiology Reports {Volumen 9}:581. 588
Daddaoua, A.; Corral-Lugo, A.; Ramos, J.L.; Krell, T.. (2017).
Identification of GntR as regulator of the glucose metabolism in Pseudomonas aeruginosa. Environmental Microbiology {Volumen 19}:3721. 3733
Huertas-Rosales, O.; Romero, M.; Heeb, S.; Espinosa-Urgel, M.; Cámara, M.; Ramos-González, M.I.. (2017).
The Pseudomonas putida CsrA/RsmA homologues negatively affect c-di-GMP pools and biofilm formation through the GGDEF/EAL response regulator CfcR. Environmental Microbiology {Volumen 19}:3551. 3566
Timmis, K.; de Vos, W.M.; Ramos, J.L.; Vlaeminck, S.E.; Prieto, A.; Danchin, A.; Verstraete, W.; de Lorenzo, V.; Lee, S.Y.; Brüssow, H.; Timmis, J.K.; Singh, B.K.. (2017).
The contribution of microbial biotechnology to sustainable development goals. Microbial Biotechnology {Volumen 10}:984. 987
Fernández, M.; Matilla, M.A.; Ortega, A.; Krell, T.. (2017).
Metabolic value chemoattractants are preferentially recognized at broad ligand range chemoreceptor of Pseudomonas putida KT2440. Frontiers in Microbiology {Volumen }:.
Timmis, K.; de Lorenzo, V.; Verstraete, W.; Ramos, J.L.; Danchin, A.; Brüssow, H.; Singh, B.K.; Timmis, J.K.. (2017).
The contribution of microbial biotechnology to economic growth and employment creation. Microbial Biotechnology {Volumen 10}:1137. 1144
Matilla, M.A.. (2017).
A technology for the investigation of biofilm transmission under shearing pressures. Microbial Biotechnology {Volumen 10}:1451. 1453
Martirani von Abercron, S.M.; Marín, P.; Solsona-Ferraz, M.; Castañeda-Cataña, M.A.; Marqués, S.. (2017).
Naphthalene biodegradation under oxygen-limiting conditions: community dynamics and the relevance of biofilm-forming capacity. Microbial Biotechnology {Volumen 10}:1781. 1796
Segura, A.. (2017).
A biotechnologist's dream: 'doubly green' processes. Microbial Biotechnology {Volumen 10}:1445. 1448
Reyes-Darias, J.A.; Krell, T.. (2017).
Riboswitches as potential targets for the development of anti-biofilm drugs. Current Topics in Medicinal Chemistry {Volumen 17}:1945. 1953
Udaondo, Z.; Duque, E.; Ramos, J.L.. (2017).
The pangenome of the genus Clostridium. Environmental Microbiology {Volumen 19}:2588. 2603
Bueno, E.; Robles, E.F.; Torres, M.J.; Krell, T.; Bedmar, E.J.; Delgado, M.J.; Mesa, S.. (2017).
Disparate response to microoxia and nitrogen oxides of the Bradyrhizobium japonicum napEDABC, nirK and norCBQD denitrification genes. Nitric Oxide - Biology and Chemistry {Volumen 68}:137. 149
Wassem, R.; Marín, A.M.; Daddaoua, A.; Monteiro, R.A.; Chubatsu, L.S.; Ramos, J.L.; Deakin, W.J.; Broughton, W.J.; Pedrosa, F.O.; Souza, E.M.. (2017).
A NodD-like protein activates transcription of genes involved with naringenin degradation in a flavonoid-dependent manner in Herbaspirillum seropedicae. Environmental Microbiology {Volumen 19}:1030. 1040
Caballo-Ponce, E.; Van Dillewijn, P.; Wittich, R.M.; Ramos, C.. (2017).
WHOP, a genomic region associated with woody hosts in the Pseudomonas syringae complex contributes to the virulence and fitness of Pseudomonas savastanoi pv. savastanoi in olive plants. Molecular Plant-Microbe Interactions {Volumen 30}:113. 126
Bastiaansen, K.C.; Civantos, C.; Bitter, W.; Llamas, M.A.. (2017).
New Insights into the regulation of cell-surface signaling activity acquired from a mutagenesis screen of the Pseudomonas putida IutY sigma/anti-sigma factor. Frontiers in Microbiology {Volumen }:.
Aranda, E.; Godoy, P.; Reina, R.; Badia-Fabregat, M.; Rosell, M.; Marco-Urrea, E.; García-Romera, I.. (2017).
Isolation of Ascomycota fungi with capability to transform PAHs: Insights into the biodegradation mechanisms of Penicillium oxalicum. International Biodeterioration & Biodegradation {Volumen 122}:141. 150
Pacheco-Sánchez, D.; Molina-Fuentes, A.; Marín, P.; Medina-Bellver, J.I.; González-López, O.; Marqués, S.. (2017).
The Azoarcus anaerobius 1,3-dihydroxybenzene (resorcinol) anaerobic degradation pathway is controlled by the coordinated activity of two enhancer-binding proteins. Applied and Environmental Microbiology {Volumen }:.
Bernal, P.; Allsopp, L.P.; Filloux, A.; Llamas, M.A.. (2017).
The Pseudomonas putida T6SS is a plant warden against phytopathogens. ISME Journal {Volumen 11}:972. 987
López-Farfán, D.; Reyes-Darias, J.A.; Krell, T.. (2017).
The expression of many chemoreceptor genes depends on the cognate chemoeffector as well as on the growth medium and phase. Current Genetics {Volumen 63}:457. 470
Segura, A.; Hernández-Sánchez, V.; Marqués, S.; Molina, L.. (2017).
Insights in the regulation of the degradation of PAHs in Novosphingobium sp. HR1a and utilization of this regulatory system as a tool for the detection of PAHs. Science of the Total Environment {Volumen 590-591}:381. 393
Matilla, M.A.; Udaondo, Z.; Krell, T.; Salmond, G.P.C.. (2017).
Genome sequence of Serratia marcescens MSU97, a plant-associated bacterium that makes multiple antibiotics. Genome Announcements {Volumen }:.
Matilla, M.A.; Krell, T.. (2017).
Chemoreceptor-based signal sensing. Current Opinion in Biotechnology {Volumen 45}:8. 14
Espinosa-Urgel, M.; Marqués, S.. (2017).
New insights in the early extracellular events in hydrocarbon and lipid biodegradation. Environmental Microbiology {Volumen 19}:15. 18
Jiménez-Díaz, L.; Caballero, A.; Pérez-Hernández, N.; Segura, A.. (2017).
Microbial alkane production for jet fuel industry: motivation, state of the art and perspectives. Microbial Biotechnology {Volumen 10}:103. 124
Molina-Henares, M.A.; Ramos-González, M.I.; Daddaoua, A.; Fernández-Escamilla, A.M.; Espinosa-Urgel, M.. (2017).
FleQ of Pseudomonas putida KT2440 is a multimeric cyclic diguanylate binding protein that differentially regulates expression of biofilm matrix components. Research in Microbiology {Volumen 168}:36. 45
Corral Lugo, A.; Daddaoua, A.; Ortega, A.; Morel, B.; Díez Peña, A.I.; Espinosa-Urgel, M.; Krell, T.. (2017).
Purification and characterization of Pseudomonas aeruginosa LasR expressed in acyl-homoserine lactone free Escherichia coli cultures. Protein Expression and Purification {Volumen 130}:107. 114
Godoy, P.; Reina, R.; Calderón, A.; Wittich, R.M.; García-Romera, I.; Aranda, E.. (2016).
Exploring the potential of fungi isolated from PAH-polluted soil as a source of xenobiotics-degrading fungi. Environmental Science and Pollution Research {Volumen 23}:20985. 20996
Matilla, M.A.; Drew, A.; Udaondo, Z.; Krell, T.; Salmond, G.P.C.. (2016).
Genome sequence of Serratia plymuthica A153, a model rhizobacterium for the investigation of the synthesis and regulation of haterumalides, zeamine, and andrimid. genome announcements {Volumen }:.
Molina, L.; Geoffroy, V.A.; Segura, A.; Udaondo, Z.; Ramos, J.L.. (2016).
Iron uptake analysis in a set of clinical isolates of pseudomonas putida. Frontiers in Microbiology {Volumen }:.
Martín-Mora, D.; Ortega, A.; Reyes-Darias, J.A.; García, V.; López-Farfán, D.; Matilla, M.A.; Krell, T.. (2016).
Identification of a chemoreceptor in Pseudomonas aeruginosa that specifically mediates chemotaxis toward α-ketoglutarate. Frontiers in Microbiology {Volumen }:.
Martirani-Von Abercron, S.M.; Pacheco, D.; Benito-Santano, P.; Marín, P.; Marqués, S.. (2016).
Polycyclic aromatic hydrocarbon-induced changes in bacterial community structure under anoxic nitrate reducing conditions. Frontiers in Microbiology {Volumen }:.
Rodríguez-Conde, S.; Molina, L.; González, P.; García-Puente, A.; Segura, A.. (2016).
Degradation of phenanthrene by Novosphingobium sp. HS2a improved plant growth in PAHs-contaminated environments. Applied Microbiology and Biotechnology {Volumen 100}:10627. 10636
Marín, A.M.; de la Torre, J.; Marques Oliveira, A.R.; Barison, A.; Satie Chubatsu, L.; Adele Monteiro, R.; de Oliveira Pedrosa, F.; Maltempi de Souza, E.; Wassem, R.; Duque, E.; Ramos, J.L.. (2016).
Genetic and functional characterization of a novel meta-pathway for degradation of naringenin in Herbaspirillum seropedicae SmR1. Environmental Microbiology {Volumen 18}:4653. 4661
Molina-Santiago, C.; Cordero, B.F.; Daddaoua, A.; Udaondo, Z.; Manzano, J.; Valdivia, M.; Segura, A.; Ramos, J.L.; Duque, E.. (2016).
Pseudomonas putida as a platform for the synthesis of aromatic compounds. Microbiology {Volumen 162}:1535. 1543
Hernández-Sánchez, V.; Molina, L.; Ramos, J.L.; Segura, A.. (2016).
New family of biosensors for monitoring BTX in aquatic and edaphic environments. Microbial Biotechnology {Volumen 9}:858. 867
Corral-Lugo, A.; de la Torre, J.; Matilla, M.A.; Fernández, M.; Morel, B.; Espinosa-Urgel, M.; Krell, T.. (2016).
Assessment of the contribution of chemoreceptor-based signalling to biofilm formation. Environmental Microbiology {Volumen 18}:3355. 3372
Martín-Mora, D.; Reyes-Darias, J.A.; Ortega, Á.; Corral-Lugo, A.; Matilla, M.A.; Krell, T.. (2016).
McpQ is a specific citrate chemoreceptor that responds preferentially to citrate/metal ion complexes. Environmental Microbiology {Volumen 18}:3284. 3295
Udaondo, Z.; Molina, L.; Segura, A.; Duque, E.; Ramos, J.L.. (2016).
Analysis of the core genome and pangenome of Pseudomonas putida. Environmental Microbiology {Volumen 18}:3268. 3283
Quesada, J.M.; Otero-Asman, J.R.; Bastiaansen, K.C.; Civantos, C.; Llamas, M.A.. (2016).
The activity of the pseudomonas aeruginosa virulence regulator σVreI Is modulated by the anti-σ factor VreR and the transcription factor PhoB. Frontiers in Microbiology {Volumen }:.
Huertas-Rosales, O.; Ramos-González, M.I.; Espinosa-Urgel, M.. (2016).
Selfregulation and interplay of Rsm family proteins modulate the lifestyle of Pseudomonas putida. Applied and Environmental Microbiology {Volumen 82}:5673. 5686
Ramos-González, M.I.; Travieso, M.L.; Soriano, M.I.; Matilla, M.A.; Huertas-Rosales, O.; Barrientos-Moreno, L.; Tagua, V.G.; Espinosa-Urgel, M.. (2016).
Genetic dissection of the regulatory network associated with high c-di-GMP levels in Pseudomonas putida KT2440. Frontiers in Microbiology {Volumen }:.
Fernández, M.; Morel, B.; Ramos, J.L.; Krell, T.. (2016).
Paralogous regulators ArsR1 and ArsR2 of Pseudomonas putida KT2440 as a basis for arsenic biosensor development. Applied and Environmental Microbiology {Volumen 82}:4133. 4144
Rico-Jiménez, M.; Reyes-Darias, J.A.; Ortega, A.; Díez Peña, A.I.; Morel, B.; Krell, T.. (2016).
Two different mechanisms mediate chemotaxis to inorganic phosphate in Pseudomonas aeruginosa. Scientific Reports {Volumen }:.
Corral-Lugo, A.; Daddaoua, A.; Ortega, A.; Espinosa-Urgel, M.; Krell, T.. (2016).
So different and still so similar: The plant compound rosmarinic acid mimics bacterial homoserine lactone quorum sensing signals. Communitative and Integrative Biology {Volumen 9}:1. 4
Wittich, R.M.; González, B.. (2016).
Editorial overview: Environmental biotechnology - quo vadis?. Current Opinion in Biotechnology {Volumen 38}:viii. x
Espinosa-Urgel, M.. (2016).
Learning when (and how) to shut up: Intercellular signal turnover in Xanthomonas. Environmental Microbiology {Volumen 18}:314. 315
Molina, L.; Udaondo, Z.; Duque, E.; Fernández, M.; Bernal, P.; Roca, A.; de La Torre, J.; Ramos, J.L.. (2016).
Specific gene loci of clinical Pseudomonas putida isolates. PLoS ONE {Volumen }:.
Fernández, M.; Morel, B.; Corral-Lugo, A.; Rico-Jiménez, M.; Martín-Mora, D.; López-Farfán, D.; Reyes-Darias, J.A.; Matilla, M.A.; Ortega, Á.; Krell, T.. (2016).
Identification of ligands for bacterial sensor proteins. Current Genetics {Volumen 62}:143. 147
Fernández, M.; Morel, B.; Corral-Lugo, A.; Krell, T.. (2016).
Identification of a chemoreceptor that specifically mediates chemotaxis toward metabolizable purine derivatives. Molecular Microbiology {Volumen 99}:34. 42
Corral-Lugo, A.; Daddaoua, A.; Ortega, A.; Espinosa-Urgel, M.; Krell, T.. (2016).
Rosmarinic acid is a homoserine lactone mimic produced by plants that activates a bacterial quorum-sensing regulator. Science signaling {Volumen }:.
Acosta-González, A.; Marqués, S.. (2016).
Bacterial diversity in oil-polluted marine coastal sediments. Current Opinion in Biotechnology {Volumen 38}:24. 32
Pascual, J.; Blanco, S.; García-López, M.; García-Salamanca, A.; Bursakov, S.A.; Genilloud, O.; Ramos, J.L.; van Dillewijn, P.. (2016).
Assessing bacterial diversity in the rhizosphere of Thymus zygis growing in the Sierra Nevada National Park (Spain) through culture-dependent and independent approaches. PLoS ONE {Volumen }:.
Pascual, J.; Udaondo, Z.; Molina, L.; Segura, A.; Esteve-Núñez, A.; Caballero, A.; Duque, E.; Ramos, J.L.; van Dillewijn, P.. (2015).
Draft genome sequence of Pseudomonas putida JLR11, a facultative anaerobic 2,4,6-trinitrotoluene biotransforming bacterium.. Genome Announcements {Volumen }:.
Monson, R.; Smith, D.S.; Matilla, M.A.; Roberts, K.; Richardson, E.; Drew, A.; Williamson, N.; Ramsay, J.; Welch, M.; Salmond, G.P.C.. (2015).
A plasmid-transposon hybrid mutagenesis system effective in a broad range of enterobacteria. Frontiers in Microbiology {Volumen }:.
Fernández-Escamilla, A.M.; Fernández-Ballester, G.; Morel, B.; Casares-Atienza, S.; Ramos, J.L.. (2015).
Molecular binding mechanism of TtgR repressor to antibiotics and antimicrobials. PLoS ONE {Volumen }:.
Acosta-González, A.; Martirani-von Abercron, S.M.; Rosselló-Móra, R.; Wittich, R.M.; Marqués, S.. (2015).
The effect of oil spills on the bacterial diversity and catabolic function in coastal sediments: a case study on the Prestige oil spill. Environmental Science and Pollution Research International {Volumen 22}:15200. 15214
Molina-Fuentes, A.; Pacheco, D.; Marín, P.; Philipp, B.; Schink, B.; Marqués, S.. (2015).
Identification of the gene cluster for the anaerobic degradation of 3,5-dihydroxybenzoate (α-Resorcylate) in Thauera aromatica strain AR-1. Applied and Environmental Microbiology {Volumen 81}:7201. 7214
Bastiaansen, K.C.; Otero-Asman, J.R.; Luirink, J.; Bitter, W.; Llamas, M.A.. (2015).
Processing of cell-surface signalling anti-sigma factors prior to signal recognition is a conserved autoproteolytic mechanism that produces two functional domains. Environmental Microbiology {Volumen 17}:3263. 3277
Fernández, M.; Porcel, M.; de la Torre, J.; Molina-Henares, M.A.; Daddaoua, A.; Llamas, M.A.; Roca, A.; Carriel, V.; Garzón, I.; Ramos, J.L.; Alaminos, M.; Duque, E.. (2015).
Analysis of the pathogenic potential of nosocomial Pseudomonas putida strains. Frontiers in Microbiology {Volumen 6}:null.
Espinosa-Urgel, M.; Serrano, L.; Ramos, J.L.; Fernández-Escamilla, A.M.. (2015).
Engineering Biological Approaches for Detection of Toxic Compounds: A New Microbial Biosensor Based on the Pseudomonas putida TtgR Repressor. Molecular Biotechnology {Volumen 57}:558. 564
Reyes-Darias, J.A.; García, V.; Rico-Jiménez, M.; Corral-Lugo, A.; Lesouhaitier, O.; Juárez-Hernández, D.; Yang, Y.; Bi, S.; Feuilloley, M.; Muñoz-Rojas, J.; Sourjik, V.; Krell, T.. (2015).
Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle. Molecular Microbiology {Volumen 97}:488. 501
García, V.; Reyes-Darias, J.-A.; Martín-Mora, D.; Morel, B.; Matilla, M.A.; Krell, T.. (2015).
Identification of a chemoreceptor for C2 and C3 carboxylic acids. Applied and Environmental Microbiology {Volumen 81}:5449. 5457
Martínez, J.; Sánchez, R.; Castellanos, M.; Fernández-Escamilla, A.M.; Vázquez-Cortés, S.; Fernández-Rivas, M.; Gasset, M.. (2015).
Fish beta-parvalbumin acquires allergenic properties by amyloid assembly. Swiss Medical Weekly {Volumen 145}:null.
Sampedro, I.; Parales, R.E.; Krell, T.; Hill, J.E.. (2015).
Pseudomonas chemotaxis. FEMS Microbiology Reviews {Volumen 39}:17. 46
Krell, T.. (2015).
Tackling the bottleneck in bacterial signal transduction research: High-throughput identification of signal molecules. Molecular Microbiology {Volumen 96}:685. 688
Bastiaansen, K.C.; Van Ulsen, P.; Wijtmans, M.; Bitter, W.; Llamas, M.A.. (2015).
Self-cleavage of the Pseudomonas aeruginosa cell-surface signaling anti-sigma factor FoxR occurs through an N-O acyl rearrangement. Journal of Biological Chemistry {Volumen 290}:12237. 12246
Reyes-Darias, J.A.; Yang, Y.; Sourjik, V.; Krell, T.. (2015).
Correlation between signal input and output in PctA and PctB amino acid chemoreceptor of Pseudomonas aeruginosa. Molecular Microbiology {Volumen 96}:513. 525
Hellberg, J.E.E.U.; Matilla, M.A.; Salmond, G.P.C.. (2015).
The broad-spectrum antibiotic, zeamine, kills the nematode worm Caenorhabditis elegans. Frontiers in Microbiology {Volumen 6}:null.
Filloux, A.; Ramos, J.-L.. (2015).
Preface. Methods in Molecular Biology {Volumen 1149}:5. 6
Molina-Santiago, C.; Udaondo, Z.; Ramos, J.-L.. (2015).
Draft whole-genome sequence of the antibiotic-producing soil isolate Pseudomonas sp. strain 250J. Environmental Microbiology Reports {Volumen 7}:288. 292
Gómez-Lozano, M.; Marvig, R.L.; Molina-Santiago, C.; Tribelli, P.M.; Ramos, J.-L.; Molin, S.. (2015).
Diversity of small RNAs expressed in Pseudomonas species. Environmental Microbiology Reports {Volumen 7}:227. 236
Basler, G.; Simeonidis, E.. (2015).
Integrating food webs with metabolic networks: Modeling contaminant degradation in marine ecosystems. Frontiers in Genetics {Volumen 5}:null.
Pizarro-Tobias, P.; Niqui, J.L.; Roca, A.; Solano, J.; Fernandez, M.; Bastida, F.; Garcia, C.; Ramos, J.L.. (2015).
Field trial on removal of petroleum-hydrocarbon pollutants using a microbial consortium for bioremediation and rhizoremediation. Environmental Microbiology Reports {Volumen 7}:85. 94
Reyes-Darias, J.A.; Sánchez-Luque, F.J.; Morales, J.C.; Pérez-Rentero, S.; Eritja, R.; Berzal-Herranz, A.. (2015).
Glucose conjugation of anti-HIV-1 oligonucleotides containing unmethylated CpG motifs reduces their immunostimulatory activity. Chembiochem: a European Journal of Chemical Biology {Volumen 16}:584. 591
Pizarro-Tobías, P.; Fernández, M.; Niqui, J.L.; Solano, J.; Duque, E.; Ramos, J.-L.; Roca, A.. (2015).
Restoration of a Mediterranean forest after a fire: Bioremediation and rhizoremediation field-scale trial. Microbial Biotechnology {Volumen 8}:77. 92
Silva-Jiménez, H.; Ortega, A.; García-Fontana, C.; Ramos, J.L.; Krell, T.. (2015).
Multiple signals modulate the activity of the complex sensor kinase TodS. Microbial Biotechnology {Volumen 8}:103. 115
Ortiz, N.; Armada, E.; Duque, E.; Roldán, A.; Azcón, R.. (2015).
Contribution of arbuscular mycorrhizal fungi and/or bacteria to enhancing plant drought tolerance under natural soil conditions: Effectiveness of autochthonous or allochthonous strains. Journal of Plant Physiology {Volumen 174}:87. 96
Mayola, A.; Irazoki, O.; Martínez, I.A.; Petrov, D.; Menolascina, F.; Stocker, R.; Reyes-Darias, J.A.; Krell, T.; Barbé, J.; Campoy, S.. (2014).
RecA protein plays a role in the chemotactic response and chemoreceptor clustering of Salmonella enterica. PLoS ONE {Volumen 9}:e105578.
Llamas, M.A.; van der Sar, A.M.. (2014).
Assessing Pseudomonas virulence with nonmammalian host: zebrafish. Methods in molecular biology (Clifton, N,J,) {Volumen 1149}:709. 721
Thijs, S.; Van Dillewijn, P.; Sillen, W.; Truyens, S.; Holtappels, M.; D¿Haen, J.; Carleer, R.; Weyens, N.; Ameloot, M.; Ramos, J.-L.; Vangronsveld, J.. (2014).
Exploring the rhizospheric and endophytic bacterial communities of Acer pseudoplatanus growing on a TNT-contaminated soil: towards the development of a rhizocompetent TNT-detoxifying plant growth promoting consortium. Plant and Soil {Volumen 385}:15. 36
Camejo, D.; Martí, M.C.; Martínez-Alcalá, I.; Medina-Bellver, J.I.; Marqués, S.; Jiménez, A.. (2014).
Effect of Fe deficiency on alfalfa plants grown in the presence of Pseudomonas. Journal of Agricultural Science {Volumen 152}:731. 740
Fernández, M.; Udaondo, Z.; Niqui, J.-L.; Duque, E.; Ramos, J.-L.. (2014).
Synergic role of the two ars operons in arsenic tolerance in Pseudomonas putida KT2440. Environmental Microbiology Reports {Volumen 6}:483. 489
Lizana, J.A.; López, S.; Marchal, A.; Serrano, U.; Velasco, D.; Espinosa-Urgel, M.. (2014).
Use of plant extracts to block bacterial biofilm formation. High school students for agricultural science research {Volumen 3}:43. 50
Bastiaansen, K.C.; Ibañez, A.; Ramos, J.L.; Bitter, W.; Llamas, M.A.. (2014).
The Prc and RseP proteases control bacterial cell-surface signalling activity. Environmental Microbiology {Volumen 16}:2433. 2443
Llamas, M.A.; Imperi, F.; Visca, P.; Lamont, I.L.. (2014).
Cell-surface signaling in Pseudomonas: Stress responses, iron transport, and pathogenicity. FEMS Microbiol Rev {Volumen 38}:569. 597
Daddaoua, A.; Molina-Santiago, C.; La Torre, J.D.; Krell, T.; Ramos, J.-L.. (2014).
GtrS and GltR form a two-component system: The central role of 2-ketogluconate in the expression of exotoxin A and glucose catabolic enzymes in Pseudomonas aeruginosa. Nucleic Acids Research {Volumen 42}:7654. 7665
Méndez-García, C.; Mesa, V.; Sprenger, R.R.; Richter, M.; Diez, M.S.; Solano, J.; Bargiela, R.; Golyshina, O.V.; Manteca, Á.; Ramos, J.L.; Gallego, J.R.; Llorente, I.; Martins Dos Santos, V.A.P.; Jensen, O.N.; Peláez, A.I.; Sánchez, J.; Ferrer, M.. (2014).
Microbial stratification in low pH oxic and suboxic macroscopic growths along an acid mine drainage. ISME Journal {Volumen 8}:1259. 1274
Ortega, A.; Krell, T.. (2014).
The HBM domain: Introducing bimodularity to bacterial sensing. Protein Science {Volumen 23}:332. 336
Cañadas-Garre, M.; Fernandez-Escamilla, A.; Fernandez-Ballester, G.; Becerra-Massare, P.; García-Calvente, C.; Ramos, J.; Llamas-Elvira, J.. (2014).
Novel BRAFI599Insmutation identified in a follicular variant of a papillary thyroid carcinoma: A molecular modeling approach. Endocrine Practice {Volumen 20}:e75. e79
Ortega-González, M.; Sánchez De Medina, F.; Molina-Santiago, C.; López-Posadas, R.; Pacheco, D.; Krell, T.; Martínez-Augustin, O.; Abdelali, D.. (2014).
Fructooligosacharides reduce Pseudomonas aeruginosa PAO1 pathogenicity through distinct mechanisms. PLoS ONE {Volumen 9}:null.
Chavarría, M.; Durante-Rodríguez, G.; Krell, T.; Santiago, C.; Brezovsky, J.; Damborsky, J.; De Lorenzo, V.. (2014).
Fructose 1-phosphate is the one and only physiological effector of the Cra (FruR) regulator of Pseudomonas putida. FEBS Open Bio {Volumen 4}:377. 386
García-Fontana, C.; Lugo, A.C.; Krell, T.. (2014).
Structural biology: Specificity of the CheR2 methyltransferase in pseudomonas aeruginosa is directed by a C-terminal pentapeptide in the McpB chemoreceptor. Science signaling {Volumen 7}:ra34.
Molina-Santiago, C.; Daddaoua, A.; Fillet, S.; Duque, E.; Ramos, J.-L.. (2014).
Interspecies signalling: Pseudomonas putida efflux pump TtgGHI is activated by indole to increase antibiotic resistance. Environmental Microbiology {Volumen 16}:1267. 1281
Molina, L.; Udaondo, Z.; Duque, E.; Fernández, M.; Molina-Santiago, C.; Roca, A.; Porcel, M.; De La Torre, J.; Segura, A.; Plesiat, P.; Jeannot, K.; Ramos, J.-L.. (2014).
Antibiotic resistance determinants in a Pseudomonas putida strain isolated from a hospital. PLoS ONE {Volumen 9}:null.
Molina-Santiago, C.; Ramos, J.L.. (2014).
Bactericidal and bacteriostatic antibiotics and the Fenton reaction. Microbial Biotechnology {Volumen 7}:194. 195
Martínez-Gil, M.; Ramos-González, M.I.; Espinosa-Urgel, M.. (2014).
Roles of cyclic Di-GMP and the Gac system in transcriptional control of the genes coding for the Pseudomonas putida adhesins LapA and LapF. Journal of Bacteriology {Volumen 196}:1484. 1495
Molina-Santiago, C.; Daddaoua, A.; Fillet, S.; Krell, T.; Morel, B.; Duque, E.; Ramos, J.L.. (2014).
Identification of new residues involved in intramolecular signal transmission in a prokaryotic transcriptional repressor. Journal of Bacteriology {Volumen 196}:588. 594
Baños, F.G.D.; Díez Peña, A.I.; Hernánez Cifre, J.G.; López Martínez, M.C.; Ortega, A.; García De La Torre, J.. (2014).
Influence of ionic strength on the flexibility of alginate studied by size exclusion chromatography. Carbohydrate Polymers {Volumen 102}:223. 230
Daddaoua, A.; Krell, T.; Ramos, J.-L.. (2013).
Transcriptional control by two interacting regulatory proteins: Identification of the PtxS binding site at PtxR. Nucleic Acids Research {Volumen 41}:10150. 10156
Rico-Jiménez, M.; Muñoz-Martínez, F.; Krell, T.; Gavira, J.A.; Pineda-Molina, E.. (2013).
Purification, crystallization and preliminary crystallographic analysis of the ligand-binding regions of the PctA and PctB chemoreceptors from Pseudomonas aeruginosa in complex with amino acids. Acta Crystallographica Section F: Structural Biology and Crystallization Communications {Volumen 69}:1431. 1435
Sevilla, E.; Alvarez-Ortega, C.; Krell, T.; Rojo, F.. (2013).
The Pseudomonas putidaHskA hybrid sensor kinase responds to redox signals and contributes to the adaptation of the electron transport chain composition in response to oxygen availability. Environmental Microbiology Reports {Volumen 5}:825. 834
Udaondo, Z.; Molina, L.; Daniels, C.; Gómez, M.J.; Molina-Henares, M.A.; Matilla, M.A.; Roca, A.; Fernández, M.; Duque, E.; Segura, A.; Ramos, J.L.. (2013).
Metabolic potential of the organic-solvent tolerant Pseudomonas putidaDOT-T1E deduced from its annotated genome. Microbial Biotechnology {Volumen 6}:598. 611
Bernal, P.; Molina-Santiago, C.; Daddaoua, A.; Llamas, M.A.. (2013).
Antibiotic adjuvants: Identification and clinical use. Microbial Biotechnology {Volumen 6}:445. 449
Aranda, E.; Scervino, J.M.; Godoy, P.; Reina, R.; Ocampo, J.A.; Wittich, R.-M.; García-Romera, I.. (2013).
Role of arbuscular mycorrhizal fungus Rhizophagus custos in the dissipation of PAHs under root-organ culture conditions. Environmental Pollution {Volumen 181}:182. 189
Faure, L.M.; Llamas, M.A.; Bastiaansen, K.C.; Bentzmann, S.; Bigot, S.. (2013).
Phosphate starvation relayed by PhoB activates the expression of the Pseudomonas aeruginosa σvreI ECF factor and its target genes. Microbiology {Volumen 159}:1315. 1327
García-Fontana, C.; Reyes-Darias, J.A.; Muñoz-Martínez, F.; Alfonso, C.; Morel, B.; Ramos, J.L.; Krell, T.. (2013).
High specificity in CheR methyltransferase function: CheR2 of pseudomonas putida is essential for chemotaxis, whereas CheR1 is involved in biofilm formation. Journal of Biological Chemistry {Volumen 288}:18987. 18999
Rico-Jiménez, M.; Muñoz-Martínez, F.; García-Fontana, C.; Fernandez, M.; Morel, B.; Ortega, A.; Ramos, J.L.; Krell, T.. (2013).
Paralogous chemoreceptors mediate chemotaxis towards protein amino acids and the non-protein amino acid gamma-aminobutyrate (GABA). Molecular Microbiology {Volumen 88}:1230. 1243
Martínez-Gil, M.; Quesada, J.M.; Ramos-González, M.I.; Soriano, M.I.; de Cristóbal, R.E.; Espinosa-Urgel, M.. (2013).
Interplay between extracellular matrix components of Pseudomonas putida biofilms. Research in Microbiology {Volumen 164}:382. 389
Steffan, R.J.; Ramos, J.L.. (2013).
Environmental biotechnology. Current Opinion in Biotechnology {Volumen 24}:421. 422
Krell, T.; Lacal, J.; Reyes-Darias, J.A.; Jimenez-Sanchez, C.; Sungthong, R.; Ortega-Calvo, J.J.. (2013).
Bioavailability of pollutants and chemotaxis. Current Opinion in Biotechnology {Volumen 24}:451. 456
Fernández, M.; Conde, S.; Duque, E.; Ramos, J.-L.. (2013).
In vivo gene expression of Pseudomonas putidaKT2440 in the rhizosphere of different plants. Microbial Biotechnology {Volumen 6}:307. 313
Sánchez De La Campa, A.; García-Salamanca, A.; Solano, J.; De La Rosa, J.; Ramos, J.-L.. (2013).
Chemical and microbiological characterization of atmospheric particulate matter during an intense african dust event in Southern Spain. Environmental Science and Technology {Volumen 47}:3630. 3638
Lacal, J.; Reyes-Darias, J.A.; García-Fontana, C.; Ramos, J.-L.; Krell, T.. (2013).
Tactic responses to pollutants and their potential to increase biodegradation efficiency. Journal of Applied Microbiology {Volumen 114}:923. 933
Verónica Hernández Sánchez; Regina-Michaela Wittich; Elke Lang. (2013).
The three-species consortium of genetically improved strains Cupriavidus necator RW112, Burkholderia xenovorans RW118, and Pseudomonas pseudoalcaligenes RW120 grows with technical polychlorobiphenyl, Aroclor 1242. Frontiers in Microbiology {Volumen }:.
Acosta-González, Alejandro; Rosselló-Mora, ramón; silvia marqués. (2013).
Diversity of Benzylsuccinate Synthase-Like (bssA) Genes in Hydrocarbon-Polluted Marine Sediments Suggests Substrate-Dependent Clustering. Applied and Environmental Microbiology {Volumen 79}:3667. 3676
Emma Sevilla; Hortencia Silva-Jiménez; Estrella Duque; Tino Krell; Fernando Rojo. (2013).
The Pseudomonas putida HskA hybrid sensor kinase controls the composition of the electron transport chain. Environmental Microbiology Reports {Volumen 5}:291. 300
De Lorenzo, V.; Pieper, D.; Ramos, J.L.. (2013).
From the test tube to the environment-and back. Environmental Microbiology {Volumen 15}:6. 11
GarcÃa-Salamanca, A.; Molina-Henares, M.A.; van Dillewijn, P.; Solano, J.; Pizarro-TobÃas, P.; Roca, A.; Duque, E.; Ramos, J.L.. (2013).
Bacterial diversity in the rhizosphere of maize and the surrounding carbonate-rich bulk soil. Microbial Biotechnology {Volumen 6}:36. 44
Roca A.; Pizarro-Tobías P.; Udaondo Z.; Fernánez M.; Matilla M.A.; Molina-Henares M.A.; Molina L.; Segura A.; Duque E.; Ramos J.L.. (2013).
Analysis of the plant growth-promoting properties encoded by the genome of the rhizobacterium Pseudomonas putida BIRD-1. Environmental Microbiology {Volumen 15}:780. 794
Segura A.; Ramos J.L.. (2013).
Plant-bacteria interactions in the removal of pollutants. Current Opinion in Biotechnology {Volumen 24}:467. 473
Alejandro Acosta-González; Rosselló-Móra, R.; Marqués, S.. (2013).
Characterization of the anaerobic microbial community in oil-polluted subtidal sediments: aromatic biodegradation potential after the Prestige oil spill.. Environmental Microbiology {Volumen 15}:00.
Verónica Hernández-Sánchez; Regina-Michaela Wittich. (2012).
Possible reasons for past failures of genetic engineering techniques for creating novel, xenobiotics-degrading bacteria. Bioengineered bugs {Volumen }:.
MartÃnez-Gil, M.; Romero, D.; Kolter, R.; Espinosa-Urgel, M.. (2012).
Calcium causes multimerization of the large adhesin LapF and modulates biofilm formation by Pseudomonas putida. Journal of Bacteriology {Volumen 194}:6782. 6789
Buddelmeijer, N.; Espinosa-Urgel, M.. (2012).
Getting in touch: Microbial molecular devices for cell-cell and cell-surface interactions. Research in Microbiology {Volumen 163}:577. 578
Pineda-Molina E; Reyes-Darias J.A; Lacal J; Ramos J.L; Garcia-Ruiz J.M; Gavira J.A; Krell T.. (2012).
Evidence for chemoreceptors with bimodular ligand binding regions harboring two signal binding sites. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA {Volumen 109}:18926. 18931
Molina-Santiago C.; Udaondo Z.; Marín A.; García-Salamanca A.; Michán C.; Daniels C.; Molina L.; Ramos J.L.. (2012).
Evolution of antibiotic resistance, catabolic pathways and niche colonization. Microbial Biotechnology {Volumen }:.
Udaondo Z; Duque E; Fernández M; Molina L; Torre JD; Bernal P; Niqui JL; Pini C; Roca A; Matilla MA; Antonia Molina-Henares M; Silva-Jiménez H; Navarro-Avilés G; Busch; Lacal J; Krell T; Segura A; Ramos JL.. (2012).
Analysis of solvent tolerance in Pseudomonas putida DOT-T1E based on its genome sequence and a collection of mutants.. FEBS Letters {Volumen 586}:2932. 2938
Arce-Rodríguez A; Durante-Rodríguez G; Platero R; Krell T; Calles B; de Lorenzo V.. (2012).
The Crp regulator of Pseudomonas putida: evidence of an unusually high affinity for its physiological effector, cAMP.. Environmental Microbiology {Volumen 14}:702. 713
Pineda-Molina, E.; Daddaoua, A.; Krell, T.; Ramos, J.L.; GarcÃa-Ruiz, J.M.; Gavira, J.A.. (2012).
In situ X-ray data collection from highly sensitive crystals of Pseudomonas putida PtxS in complex with DNA. Acta Crystallographica Section F: Structural Biology and Crystallization Communications {Volumen 68}:1307. 1310
Quesada, J.M.; Soriano, M.I.; Espinosa-Urgel, M.. (2012).
Stability of a pseudomonas putida KT2440 bacteriophage-carried genomic island and its impact on rhizosphere fitness. Applied and Environmental Microbiology {Volumen 78}:6963. 6974
Hernández-Sánchez, V.; Wittich, R.-M.. (2012).
Possible reasons for past failures of genetic engineering techniques for creating novel, xenobiotics-degrading bacteria. Bioengineered Bugs {Volumen 3}:null.
Bernal, P.; Llamas, M.A.. (2012).
Promising biotechnological applications of antibiofilm exopolysaccharides. Microbial Biotechnology {Volumen 5}:670. 673
Wittich, R.-M.. (2012).
Challenges of the National Health System in Spain in reference to the medical care of transsexuals | Retos para el Sistema Nacional de Salud en España con respecto a la atención médica a personas transexuales. Gaceta Sanitaria {Volumen 26}:586. 587
Muñoz-Martínez, F.; García-Fontana, C.; Rico-Jiménez, M.; Alfonso, C.; Krell, T.. (2012).
Genes Encoding Cher-TPR Fusion Proteins Are Predominantly Found in Gene Clusters Encoding Chemosensory Pathways with Alternative Cellular Functions. PLoS ONE {Volumen 7}:null.
Fernández, M.; Niqui-Arroyo, J.S.; Conde, S.; Ramos, J.S.; Duque, E.. (2012).
Enhanced tolerance to naphthalene and enhanced rhizoremediation performance for Pseudomonas putida KT2440 via the NAH7 catabolic plasmid. Applied and Environmental Microbiology {Volumen 78}:5104. 5110
Daddaoua, A.; Fillet, S.; Fernández, M.; Udaondo, Z.; Krell, T.; Ramos, J.L.. (2012).
Genes for Carbon metabolism and the ToxA virulence factor in pseudomonas aeruginosa are regulated through molecular interactions of PtxR and PtxS. PLoS ONE {Volumen 7}:null.
Fernández-Piñar, R.; Espinosa-Urgel, M.; Dubern, J.-F.; Heeb, S.; Ramos, J.L.; Cámara, M.. (2012).
Fatty acid-mediated signalling between two Pseudomonas species. Environmental Microbiology Reports {Volumen 4}:417. 423
Santamaría-Hernando, S.; Krell, T.; Ramos-González, M.-I.. (2012).
Identification of a novel calcium binding motif based on the detection of sequence insertions in the animal peroxidase domain of bacterial proteins. PLoS ONE {Volumen 7}:null.
Krell, T.; Lacal, J.; Guazzaroni, M.E.; Busch, A.; Silva-Jiménez, H.; Fillet, S.; Reyes-Darías, J.A.; Muñoz-Martínez, F.; Rico-Jiménez, M.; García-Fontana, C.; Duque, E.; Segura, A.; Ramos, J.-L.. (2012).
Responses of Pseudomonas putida to toxic aromatic carbon sources. Journal of Biotechnology {Volumen 160}:25. 32
Molina-Santiago, C.; Udaondo, Z.; Marin, A.; García-Salamanca, A.; Michán, C.; Daniels, C.; Molina, L.; Ramos, J.L.. (2012).
Evolution of antibiotic resistance, catabolic pathways and niche colonization. Microbial Biotechnology {Volumen 5}:452. 454
Segura, A.; Molina, L.; Fillet, S.; Krell, T.; Bernal, P.; Muñoz-Rojas, J.; Ramos, J.-L.. (2012).
Solvent tolerance in Gram-negative bacteria. Current Opinion in Biotechnology {Volumen 23}:415. 421
Fischer, S.; Godino, A.; Quesada, J.M.; Cordero, P.; Jofré, E.; Mori, G.; Espinosa-Urgel, M.. (2012).
Characterization of a phage-like pyocin from the plant growth-promoting rhizobacterium Pseudomonas fluorescens SF4c. Microbiology {Volumen 158}:1493. 1503
Silva-Jiménez H; García-Fontana C; Cadirci BH; Ramos-González MI; Ramos JL; Krell T. (2012).
Study of the TmoS/TmoT two-component system: towards the functional characterization of the family of TodS/TodT like systems.. Microbial Biotechnology {Volumen }:.
J. A. Gavira; J. Lacal; J. L. Ramos; J. M. García-Ruiz; T. Krellb; E. Pineda-Molina. (2012).
Crystallization and crystallographic analysis of the ligand-binding domain of the Pseudomonas putida chemoreceptor McpS in complex with malate and succinate. Acta Crystallographica Section F: Structural Biology and Crystallization Communications {Volumen 68}:428. 431
Silva-Jiménez, H.; Ramos, J.L.; Krell, T.. (2012).
Construction of a prototype two-component system from the phosphorelay system TodS/TodT. Protein Engineering, Design and Selection {Volumen 25}:159. 169
Fillet, S.; Daniels, C.; Pini, C.; Krell, T.; Duque, E.; Bernal, P.; Segura, A.; Lu, D.; Zhang, X.; Ramos, J.-L.. (2012).
Transcriptional control of the main aromatic hydrocarbon efflux pump in Pseudomonas. Environmental Microbiology Reports {Volumen 4}:158. 167
Arce-Rodríguez, A.; Durante-Rodríguez, G.; Platero, R.; Krell, T.; Calles, B.; de Lorenzo, V.. (2012).
The Crp regulator of Pseudomonas putida: Evidence of an unusually high affinity for its physiological effector, cAMP. Environmental Microbiology {Volumen 14}:702. 713
Ortiz, R.; Prados, J.; Melguizo, C.; Arias, J.L.; Adolfina Ruiz, M.; Álvarez, P.J.; Caba, O.; Luque, R.; Segura, A.; Aránega, A.. (2012).
5-fluorouracil-loaded poly(ε-caprolactone) nanoparticles combined with phage E gene therapy as a new strategy against colon cancer. International journal of nanomedicine {Volumen 7}:95. 107
Fernández, M.; Conde, S.; De La Torre, J.; Molina-Santiago, C.; Ramos, J.-L.; Duque, E.. (2012).
Mechanisms of resistance to chloramphenicol in Pseudomonas putida KT2440. Antimicrobial Agents and Chemotherapy {Volumen 56}:1001. 1009
Herrera, M.C.; Daddaoua, A.; Ana, A.F.; Ramos, J.-L.. (2012).
Involvement of the global crp regulator in cyclic amp-dependent utilization of aromatic amino acids by pseudomonas putida. Journal of Bacteriology {Volumen 194}:406. 412
Michán, C.; Ramos, J.-L.; Daniels, C.. (2012).
Explorative probes and biomarkers, chronic Salmonella infections and future vaccines. Microbial Biotechnology {Volumen 5}:1. 4
Cuadrado, N.H.; Arellano, J.B.; Calvete, J.J.; Sanz, L.; Zhadan, G.G.; Polikarpov, I.; Bursakov, S.; Roig, M.G.; Shnyrov, V.L.. (2012).
Substrate specificity of the Chamaerops excelsa palm tree peroxidase. A steady-state kinetic study. Journal of Molecular Catalysis - B Enzymatic {Volumen 74}:103. 108
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